Cheap flights Manila (Ninoy Aquino) to Kota-Kinabalu

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To

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Passengers

1 passenger, economy

Cheap flights Manila to Kota-Kinabalu

Compare prices, duration and stops

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Stops

Direct only 1 stop

Price

£45 £229 £229

Airlines

AirAsia Zest Airasia Sdn BHD CEBU Pacific Air Malaysia Airlines Royal Brunei Tigerair

Z2 501

15:10

Manila, Ninoy Aquino (MNL)

Sun, 20 sep

2h 10min

Direct

17:20

Kota-Kinabalu (BKI)

Sun, 20 sep

£76

Z2 501 🔥 Hot deal

15:10

Manila, Ninoy Aquino (MNL)

Mon, 21 sep

2h 10min

Direct

17:20

Kota-Kinabalu (BKI)

Mon, 21 sep

£60

TR 591

11:40

Manila, Ninoy Aquino (MNL)

Tue, 22 sep

23h 50min

1 stop

11:30

Kota-Kinabalu (BKI)

Wed, 23 sep +1

£123

Z2 501

15:10

Manila, Ninoy Aquino (MNL)

Wed, 23 sep

2h 10min

Direct

17:20

Kota-Kinabalu (BKI)

Wed, 23 sep

£86

TR 591

11:40

Manila, Ninoy Aquino (MNL)

Thu, 24 sep

24h 5min

1 stop

11:45

Kota-Kinabalu (BKI)

Fri, 25 sep +1

£183

BI 686

13:45

Manila, Ninoy Aquino (MNL)

Thu, 24 sep

10h 25min

1 stop

00:10

Kota-Kinabalu (BKI)

Fri, 25 sep +1

£139

AK 585

14:45

Manila, Ninoy Aquino (MNL)

Thu, 24 sep

11h 15min

1 stop

02:00

Kota-Kinabalu (BKI)

Fri, 25 sep +1

£135

Z2 501

15:10

Manila, Ninoy Aquino (MNL)

Fri, 25 sep

2h 10min

Direct

17:20

Kota-Kinabalu (BKI)

Fri, 25 sep

£60

TR 591

11:40

Manila, Ninoy Aquino (MNL)

Sat, 26 sep

15h 35min

1 stop

03:15

Kota-Kinabalu (BKI)

Sun, 27 sep +1

£178

Z2 501

15:10

Manila, Ninoy Aquino (MNL)

Sun, 27 sep

2h 10min

Direct

17:20

Kota-Kinabalu (BKI)

Sun, 27 sep

£52

TR 591

11:40

Manila, Ninoy Aquino (MNL)

Mon, 28 sep

40h 45min

2 stops

04:25

Kota-Kinabalu (BKI)

Wed, 30 sep +1

£97

Z2 501

15:10

Manila, Ninoy Aquino (MNL)

Mon, 28 sep

2h 10min

Direct

17:20

Kota-Kinabalu (BKI)

Mon, 28 sep

£54

Z2 501

15:10

Manila, Ninoy Aquino (MNL)

Wed, 30 sep

2h 10min

Direct

17:20

Kota-Kinabalu (BKI)

Wed, 30 sep

£57

BI 686

13:45

Manila, Ninoy Aquino (MNL)

Thu, 1 oct

22h 25min

1 stop

12:10

Kota-Kinabalu (BKI)

Fri, 2 oct +1

£141

Z2 501

15:10

Manila, Ninoy Aquino (MNL)

Fri, 2 oct

2h 10min

Direct

17:20

Kota-Kinabalu (BKI)

Fri, 2 oct

£56

MH 709

22:50

Manila, Ninoy Aquino (MNL)

Fri, 2 oct

11h 30min

1 stop

10:20

Kota-Kinabalu (BKI)

Sat, 3 oct +1

£131

TR 591

11:40

Manila, Ninoy Aquino (MNL)

Sat, 3 oct

15h 35min

1 stop

03:15

Kota-Kinabalu (BKI)

Sun, 4 oct +1

£118

Z2 501

15:10

Manila, Ninoy Aquino (MNL)

Sun, 4 oct

2h 10min

Direct

17:20

Kota-Kinabalu (BKI)

Sun, 4 oct

£58

Z2 501

15:10

Manila, Ninoy Aquino (MNL)

Mon, 5 oct

2h 10min

Direct

17:20

Kota-Kinabalu (BKI)

Mon, 5 oct

£57

Z2 501 🔥 Hot deal

15:10

Manila, Ninoy Aquino (MNL)

Sun, 11 oct

2h 10min

Direct

17:20

Kota-Kinabalu (BKI)

Sun, 11 oct

£55

AK 585

14:45

Manila, Ninoy Aquino (MNL)

Thu, 15 oct

11h 5min

1 stop

01:50

Kota-Kinabalu (BKI)

Fri, 16 oct +1

£120

Z2 501

15:10

Manila, Ninoy Aquino (MNL)

Fri, 23 oct

2h 10min

Direct

17:20

Kota-Kinabalu (BKI)

Fri, 23 oct

£57

Z2 501

08:15

Manila, Ninoy Aquino (MNL)

Wed, 28 oct

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Wed, 28 oct

£59

TR 591

11:30

Manila, Ninoy Aquino (MNL)

Thu, 29 oct

23h 30min

1 stop

11:00

Kota-Kinabalu (BKI)

Fri, 30 oct +1

£100

Z2 501 🔥 Hot deal

08:15

Manila, Ninoy Aquino (MNL)

Sun, 1 nov

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Sun, 1 nov

£55

Z2 501

08:15

Manila, Ninoy Aquino (MNL)

Mon, 2 nov

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Mon, 2 nov

£59

AK 583

04:55

Manila, Ninoy Aquino (MNL)

Thu, 5 nov

29h 45min

1 stop

10:40

Kota-Kinabalu (BKI)

Fri, 6 nov +1

£133

Z2 501

08:15

Manila, Ninoy Aquino (MNL)

Fri, 6 nov

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Fri, 6 nov

£61

TR 589

22:30

Manila, Ninoy Aquino (MNL)

Fri, 6 nov

28h 40min

1 stop

03:10

Kota-Kinabalu (BKI)

Sun, 8 nov +1

£117

Z2 501 🔥 Hot deal

08:15

Manila, Ninoy Aquino (MNL)

Wed, 11 nov

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Wed, 11 nov

£56

5J 501

12:00

Manila, Ninoy Aquino (MNL)

Thu, 12 nov

15h 10min

1 stop

03:10

Kota-Kinabalu (BKI)

Fri, 13 nov +1

£119

Z2 501

08:15

Manila, Ninoy Aquino (MNL)

Wed, 25 nov

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Wed, 25 nov

£59

TR 589

22:30

Manila, Ninoy Aquino (MNL)

Wed, 2 dec

26h 55min

2 stops

01:25

Kota-Kinabalu (BKI)

Fri, 4 dec +1

£116

BI 686

13:40

Manila, Ninoy Aquino (MNL)

Thu, 10 dec

10h 25min

1 stop

00:05

Kota-Kinabalu (BKI)

Fri, 11 dec +1

£145

Z2 501

08:15

Manila, Ninoy Aquino (MNL)

Sun, 20 dec

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Sun, 20 dec

£72

Z2 501

08:15

Manila, Ninoy Aquino (MNL)

Mon, 21 dec

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Mon, 21 dec

£71

TR 591

11:30

Manila, Ninoy Aquino (MNL)

Tue, 22 dec

15h 40min

1 stop

03:10

Kota-Kinabalu (BKI)

Wed, 23 dec +1

£229

Z2 501

08:15

Manila, Ninoy Aquino (MNL)

Wed, 23 dec

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Wed, 23 dec

£70

TR 591

11:30

Manila, Ninoy Aquino (MNL)

Thu, 24 dec

15h 40min

1 stop

03:10

Kota-Kinabalu (BKI)

Fri, 25 dec +1

£194

Z2 501

08:15

Manila, Ninoy Aquino (MNL)

Fri, 25 dec

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Fri, 25 dec

£71

BI 684

07:15

Manila, Ninoy Aquino (MNL)

Sat, 26 dec

3h 50min

1 stop

11:05

Kota-Kinabalu (BKI)

Sat, 26 dec

£210

Z2 501

08:15

Manila, Ninoy Aquino (MNL)

Sun, 27 dec

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Sun, 27 dec

£78

Z2 501

08:15

Manila, Ninoy Aquino (MNL)

Mon, 28 dec

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Mon, 28 dec

£78

TR 591

11:30

Manila, Ninoy Aquino (MNL)

Tue, 29 dec

15h 40min

1 stop

03:10

Kota-Kinabalu (BKI)

Wed, 30 dec +1

£227

Z2 501

08:15

Manila, Ninoy Aquino (MNL)

Wed, 30 dec

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Wed, 30 dec

£70

BI 684

07:15

Manila, Ninoy Aquino (MNL)

Sat, 2 jan

3h 50min

1 stop

11:05

Kota-Kinabalu (BKI)

Sat, 2 jan

£191

Z2 501

08:15

Manila, Ninoy Aquino (MNL)

Sun, 3 jan

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Sun, 3 jan

£90

Z2 501

08:15

Manila, Ninoy Aquino (MNL)

Wed, 6 jan

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Wed, 6 jan

£64

Z2 501

08:15

Manila, Ninoy Aquino (MNL)

Fri, 8 jan

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Fri, 8 jan

£60

Z2 501 🔥 Hot deal

08:15

Manila, Ninoy Aquino (MNL)

Sun, 10 jan

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Sun, 10 jan

£56

Low price calendar

September 2026

Price chart (September 2026)

min: £52 · max: £178

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£76

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£123

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£86

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£178

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£52

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Good deal

£54

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£57

Cheap flights Manila to Kota-Kinabalu

AirAsia Zest

Mon, Wed, Fri, Sun

Price from

£45

Tigerair

Mon, Tue, Wed, Thu, Fri, Sat

Price from

£83

Airasia Sdn BHD

Wed, Thu, Fri

Price from

£108

CEBU Pacific Air

Tue, Thu

Price from

£119

Malaysia Airlines

Fri

Price from

£131

Royal Brunei

Thu, Sat

Price from

£145

Popular destinations from Manila

All →

MNL

Manila — Kalibo

Philippines → Philippines

KLO

from

£13

MNL

Manila — Cebu City

Philippines → Philippines

CEB

from

£13

MNL

Manila — Puerto Princesa

Philippines → Philippines

PPS

from

£14

MNL

Manila — Davao City

Philippines → Philippines

DVO

from

£16

MNL

Manila — Iloilo

Philippines → Philippines

ILO

from

£16

MNL

Manila — Tagbilaran

Philippines → Philippines

TAG

from

£16

MNL

Manila — Caticlan

Philippines → Philippines

MPH

from

£16

MNL

Manila — Bacolod

Philippines → Philippines

BCD

from

£16

MNL

Manila — Tacloban

Philippines → Philippines

TAC

from

£17

Popular destinations to Kota-Kinabalu

All →

SDK

Sandakan — Kota-Kinabalu

Malaysia → Malaysia

BKI

from

£16

KUL

Kuala Lumpur — Kota-Kinabalu

Malaysia → Malaysia

BKI

from

£19

TWU

Tawau — Kota-Kinabalu

Malaysia → Malaysia

BKI

from

£20

MYY

Miri — Kota-Kinabalu

Malaysia → Malaysia

BKI

from

£21

KCH

Kuching — Kota-Kinabalu

Malaysia → Malaysia

BKI

from

£33

PEN

Penang — Kota-Kinabalu

Malaysia → Malaysia

BKI

from

£35

LBU

Labuan — Kota-Kinabalu

Malaysia → Malaysia

BKI

from

£35

JHB

Johor Bahru — Kota-Kinabalu

Malaysia → Malaysia

BKI

from

£38

Cheap flights Manila to Kota-Kinabalu

Interesting facts about the route

Flight time

2h 10min

Distance

1 097 km

Average price

£77

Most frequent flight

Z2 501

Passenger reviews

No reviews for this route yet

Internet abroad

eSIM · Malaysia

sambungkan

5 GB

data

30

days

£9

sambungkan

10 GB

data

30

days

£15

sambungkan

20 GB

data

30

days

£24

sambungkan

data

10

days

£26

sambungkan

1 GB

data

7

days

£3

Frequently Asked Questions

The average ticket price Manila Kota-Kinabalu is £77. The cheapest ticket costs £76, operated by AirAsia Zest, flight 501, departing Manila on 20 September at 15:10, arriving Kota-Kinabalu on 20 September at 17:20.

The average flight time is 2 hours 10 minutes.The fastest flight takes 2 hours 10 minutes, flight 501operated by AirAsia Zest, departing Manila on 20 September at 15:10, arriving Kota-Kinabalu on 20 September at 17:20.

Flights on the Manila - Kota-Kinabalu route are operated by the following airlines: CEBU Pacific Air, Airasia Sdn BHD, Royal Brunei, Malaysia Airlines, Tigerair, AirAsia Zest.

The distance from Manila to Kota-Kinabalu is 1097 km.