Cheap flights Manila (Ninoy Aquino) to Kota-Kinabalu

From

To

Depart

Return

Passengers

1 passenger, economy

Cheap flights Manila to Kota-Kinabalu

Compare prices, duration and stops

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Stops

Direct only 1 stop

Price

52 € 267 € 267 €

Airlines

AirAsia Zest Airasia Sdn BHD CEBU Pacific Air China Southern Airlines Malaysia Airlines Royal Brunei Tigerair

CZ 398

09:45

Manila, Ninoy Aquino (MNL)

Sat, 19 sep

6h 45min

1 stop

16:30

Kota-Kinabalu (BKI)

Sat, 19 sep

218 €

Z2 501

15:10

Manila, Ninoy Aquino (MNL)

Sun, 20 sep

2h 10min

Direct

17:20

Kota-Kinabalu (BKI)

Sun, 20 sep

88 €

Z2 501

15:10

Manila, Ninoy Aquino (MNL)

Mon, 21 sep

2h 10min

Direct

17:20

Kota-Kinabalu (BKI)

Mon, 21 sep

70 €

TR 591

11:40

Manila, Ninoy Aquino (MNL)

Tue, 22 sep

23h 50min

1 stop

11:30

Kota-Kinabalu (BKI)

Wed, 23 sep +1

143 €

Z2 501

15:10

Manila, Ninoy Aquino (MNL)

Wed, 23 sep

2h 10min

Direct

17:20

Kota-Kinabalu (BKI)

Wed, 23 sep

100 €

TR 591

11:40

Manila, Ninoy Aquino (MNL)

Thu, 24 sep

24h 5min

1 stop

11:45

Kota-Kinabalu (BKI)

Fri, 25 sep +1

213 €

BI 686

13:45

Manila, Ninoy Aquino (MNL)

Thu, 24 sep

10h 25min

1 stop

00:10

Kota-Kinabalu (BKI)

Fri, 25 sep +1

162 €

AK 585

14:45

Manila, Ninoy Aquino (MNL)

Thu, 24 sep

11h 15min

1 stop

02:00

Kota-Kinabalu (BKI)

Fri, 25 sep +1

157 €

Z2 501

15:10

Manila, Ninoy Aquino (MNL)

Fri, 25 sep

2h 10min

Direct

17:20

Kota-Kinabalu (BKI)

Fri, 25 sep

69 €

TR 591

11:40

Manila, Ninoy Aquino (MNL)

Sat, 26 sep

15h 35min

1 stop

03:15

Kota-Kinabalu (BKI)

Sun, 27 sep +1

206 €

Z2 501

15:10

Manila, Ninoy Aquino (MNL)

Sun, 27 sep

2h 10min

Direct

17:20

Kota-Kinabalu (BKI)

Sun, 27 sep

60 €

TR 591

11:40

Manila, Ninoy Aquino (MNL)

Mon, 28 sep

40h 45min

2 stops

04:25

Kota-Kinabalu (BKI)

Wed, 30 sep +1

113 €

Z2 501

15:10

Manila, Ninoy Aquino (MNL)

Mon, 28 sep

2h 10min

Direct

17:20

Kota-Kinabalu (BKI)

Mon, 28 sep

63 €

Z2 501

15:10

Manila, Ninoy Aquino (MNL)

Wed, 30 sep

2h 10min

Direct

17:20

Kota-Kinabalu (BKI)

Wed, 30 sep

67 €

BI 686

13:45

Manila, Ninoy Aquino (MNL)

Thu, 1 oct

22h 25min

1 stop

12:10

Kota-Kinabalu (BKI)

Fri, 2 oct +1

164 €

Z2 501

15:10

Manila, Ninoy Aquino (MNL)

Fri, 2 oct

2h 10min

Direct

17:20

Kota-Kinabalu (BKI)

Fri, 2 oct

65 €

MH 709

22:50

Manila, Ninoy Aquino (MNL)

Fri, 2 oct

11h 30min

1 stop

10:20

Kota-Kinabalu (BKI)

Sat, 3 oct +1

152 €

TR 591

11:40

Manila, Ninoy Aquino (MNL)

Sat, 3 oct

15h 35min

1 stop

03:15

Kota-Kinabalu (BKI)

Sun, 4 oct +1

137 €

Z2 501

15:10

Manila, Ninoy Aquino (MNL)

Sun, 4 oct

2h 10min

Direct

17:20

Kota-Kinabalu (BKI)

Sun, 4 oct

67 €

Z2 501

15:10

Manila, Ninoy Aquino (MNL)

Mon, 5 oct

2h 10min

Direct

17:20

Kota-Kinabalu (BKI)

Mon, 5 oct

66 €

Z2 501 🔥 Hot deal

15:10

Manila, Ninoy Aquino (MNL)

Sun, 11 oct

2h 10min

Direct

17:20

Kota-Kinabalu (BKI)

Sun, 11 oct

64 €

Z2 501

15:10

Manila, Ninoy Aquino (MNL)

Fri, 23 oct

2h 10min

Direct

17:20

Kota-Kinabalu (BKI)

Fri, 23 oct

66 €

Z2 501

08:15

Manila, Ninoy Aquino (MNL)

Wed, 28 oct

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Wed, 28 oct

69 €

TR 591

11:30

Manila, Ninoy Aquino (MNL)

Thu, 29 oct

23h 30min

1 stop

11:00

Kota-Kinabalu (BKI)

Fri, 30 oct +1

116 €

Z2 501 🔥 Hot deal

08:15

Manila, Ninoy Aquino (MNL)

Sun, 1 nov

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Sun, 1 nov

64 €

Z2 501

08:15

Manila, Ninoy Aquino (MNL)

Mon, 2 nov

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Mon, 2 nov

69 €

AK 583

04:55

Manila, Ninoy Aquino (MNL)

Thu, 5 nov

29h 45min

1 stop

10:40

Kota-Kinabalu (BKI)

Fri, 6 nov +1

154 €

Z2 501

08:15

Manila, Ninoy Aquino (MNL)

Fri, 6 nov

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Fri, 6 nov

70 €

TR 589

22:30

Manila, Ninoy Aquino (MNL)

Fri, 6 nov

28h 40min

1 stop

03:10

Kota-Kinabalu (BKI)

Sun, 8 nov +1

137 €

Z2 501 🔥 Hot deal

08:15

Manila, Ninoy Aquino (MNL)

Wed, 11 nov

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Wed, 11 nov

66 €

5J 501

12:00

Manila, Ninoy Aquino (MNL)

Thu, 12 nov

15h 10min

1 stop

03:10

Kota-Kinabalu (BKI)

Fri, 13 nov +1

139 €

Z2 501

08:15

Manila, Ninoy Aquino (MNL)

Wed, 25 nov

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Wed, 25 nov

69 €

TR 589

22:30

Manila, Ninoy Aquino (MNL)

Wed, 2 dec

26h 55min

2 stops

01:25

Kota-Kinabalu (BKI)

Fri, 4 dec +1

135 €

BI 686

13:40

Manila, Ninoy Aquino (MNL)

Thu, 10 dec

10h 25min

1 stop

00:05

Kota-Kinabalu (BKI)

Fri, 11 dec +1

168 €

Z2 501

08:15

Manila, Ninoy Aquino (MNL)

Sun, 20 dec

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Sun, 20 dec

84 €

Z2 501

08:15

Manila, Ninoy Aquino (MNL)

Mon, 21 dec

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Mon, 21 dec

83 €

TR 591

11:30

Manila, Ninoy Aquino (MNL)

Tue, 22 dec

15h 40min

1 stop

03:10

Kota-Kinabalu (BKI)

Wed, 23 dec +1

267 €

Z2 501

08:15

Manila, Ninoy Aquino (MNL)

Wed, 23 dec

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Wed, 23 dec

82 €

TR 591

11:30

Manila, Ninoy Aquino (MNL)

Thu, 24 dec

15h 40min

1 stop

03:10

Kota-Kinabalu (BKI)

Fri, 25 dec +1

226 €

Z2 501

08:15

Manila, Ninoy Aquino (MNL)

Fri, 25 dec

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Fri, 25 dec

82 €

BI 684

07:15

Manila, Ninoy Aquino (MNL)

Sat, 26 dec

3h 50min

1 stop

11:05

Kota-Kinabalu (BKI)

Sat, 26 dec

245 €

Z2 501

08:15

Manila, Ninoy Aquino (MNL)

Sun, 27 dec

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Sun, 27 dec

91 €

Z2 501

08:15

Manila, Ninoy Aquino (MNL)

Mon, 28 dec

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Mon, 28 dec

91 €

TR 591

11:30

Manila, Ninoy Aquino (MNL)

Tue, 29 dec

15h 40min

1 stop

03:10

Kota-Kinabalu (BKI)

Wed, 30 dec +1

264 €

BI 684

07:15

Manila, Ninoy Aquino (MNL)

Sat, 2 jan

3h 50min

1 stop

11:05

Kota-Kinabalu (BKI)

Sat, 2 jan

222 €

Z2 501

08:15

Manila, Ninoy Aquino (MNL)

Sun, 3 jan

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Sun, 3 jan

104 €

Z2 501

08:15

Manila, Ninoy Aquino (MNL)

Wed, 6 jan

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Wed, 6 jan

74 €

Z2 501

08:15

Manila, Ninoy Aquino (MNL)

Fri, 8 jan

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Fri, 8 jan

70 €

Z2 501 🔥 Hot deal

08:15

Manila, Ninoy Aquino (MNL)

Sun, 10 jan

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Sun, 10 jan

66 €

Z2 501

08:15

Manila, Ninoy Aquino (MNL)

Mon, 11 jan

2h 5min

Direct

10:20

Kota-Kinabalu (BKI)

Mon, 11 jan

70 €

Low price calendar

September 2026

Price chart (September 2026)

min: 60 € · max: 218 €

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143 €

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157 €

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69 €

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206 €

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60 €

28

Good deal

63 €

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67 €

Cheap flights Manila to Kota-Kinabalu

AirAsia Zest

Mon, Wed, Fri, Sun

Price from

52 €

Tigerair

Mon, Tue, Wed, Thu, Fri, Sat

Price from

96 €

Airasia Sdn BHD

Wed, Thu, Fri

Price from

126 €

CEBU Pacific Air

Tue, Thu

Price from

149 €

Malaysia Airlines

Fri

Price from

152 €

Royal Brunei

Thu, Sat

Price from

168 €

China Southern Airlines

Sat

Price from

218 €

Popular destinations from Manila

All →

MNL

Manila — Kalibo

Philippines → Philippines

KLO

from

15 €

MNL

Manila — Cebu City

Philippines → Philippines

CEB

from

15 €

MNL

Manila — Puerto Princesa

Philippines → Philippines

PPS

from

16 €

MNL

Manila — Davao City

Philippines → Philippines

DVO

from

19 €

MNL

Manila — Iloilo

Philippines → Philippines

ILO

from

19 €

MNL

Manila — Tagbilaran

Philippines → Philippines

TAG

from

19 €

MNL

Manila — Caticlan

Philippines → Philippines

MPH

from

19 €

MNL

Manila — Bacolod

Philippines → Philippines

BCD

from

19 €

MNL

Manila — Tacloban

Philippines → Philippines

TAC

from

19 €

Popular destinations to Kota-Kinabalu

All →

SDK

Sandakan — Kota-Kinabalu

Malaysia → Malaysia

BKI

from

19 €

KUL

Kuala Lumpur — Kota-Kinabalu

Malaysia → Malaysia

BKI

from

22 €

TWU

Tawau — Kota-Kinabalu

Malaysia → Malaysia

BKI

from

23 €

MYY

Miri — Kota-Kinabalu

Malaysia → Malaysia

BKI

from

24 €

KCH

Kuching — Kota-Kinabalu

Malaysia → Malaysia

BKI

from

38 €

PEN

Penang — Kota-Kinabalu

Malaysia → Malaysia

BKI

from

41 €

LBU

Labuan — Kota-Kinabalu

Malaysia → Malaysia

BKI

from

41 €

JHB

Johor Bahru — Kota-Kinabalu

Malaysia → Malaysia

BKI

from

45 €

Cheap flights Manila to Kota-Kinabalu

Interesting facts about the route

Flight time

2h 10min

Distance

1 097 km

Average price

91 €

Most frequent flight

Z2 501

Passenger reviews

No reviews for this route yet

Internet abroad

eSIM · Malaysia

sambungkan

5 GB

data

30

days

€10

sambungkan

10 GB

data

30

days

€17

sambungkan

20 GB

data

30

days

€28

sambungkan

data

10

days

€30

sambungkan

1 GB

data

7

days

€4

Frequently Asked Questions

The average ticket price Manila Kota-Kinabalu is €91. The cheapest ticket costs €70, operated by AirAsia Zest, flight 501, departing Manila on 21 September at 15:10, arriving Kota-Kinabalu on 21 September at 17:20.

The average flight time is 6 hours 45 minutes.The fastest flight takes 2 hours 10 minutes, flight 501operated by AirAsia Zest, departing Manila on 20 September at 15:10, arriving Kota-Kinabalu on 20 September at 17:20.

Flights on the Manila - Kota-Kinabalu route are operated by the following airlines: Cebu Pacific, Airasia Sdn BHD, Royal Brunei, China Southern Airlines, Malaysia Airlines, Tigerair, AirAsia Zest.

The distance from Manila to Kota-Kinabalu is 1097 km.